Index _ | A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z _ __init__() (APIClient method) (APIError method) (AsyncBinaryIterator method) (AsyncBinaryIteratorIO method) (AsyncReadable method) (AsyncWritable method) (BinaryIteratorIO method) (CryoSPARC method) (Dataset method) (ExternalJobController method) (hashcache method) (JobController method) (ProjectController method) (Row method) (Spool method) (Stream method) (WorkspaceController method) __new__() (Column static method) (DsetType method) (DT method) (hashcache static method) (Header static method) A abinit_K (LiveAbinitParams attribute) abinit_num_particles (LiveAbinitParams attribute) abinit_symmetry (LiveAbinitParams attribute) abs_file_path (Exposure attribute) accel_kv (CTF attribute) (LivePreprocessingParams attribute) (MScopeParams attribute) access_token (Token attribute) accessed_at (JobLastAccessed attribute) (ProjectLastAccessed attribute) (SessionLastAccessed attribute) (WorkspaceLastAccessed attribute) active (Notification attribute) active_jobs (LicenseInstance attribute) add_checkpoint() (JobsAPI method) add_cluster() (ResourcesAPI method) add_event_log() (JobsAPI method) add_external_input() (JobsAPI method) add_external_output() (JobsAPI method) add_fields() (Dataset method) add_image_log() (JobsAPI method) add_input() (ExternalJobController method) add_lane() (ResourcesAPI method) add_manual_pick() (ExposuresAPI method) add_node() (ResourcesAPI method) add_output() (ExternalJobController method) add_tag() (JobsAPI method) (ProjectsAPI method) (SessionsAPI method) (WorkspacesAPI method) add_user_access() (ProjectsAPI method) address (Email attribute) admin_exists() (UsersAPI method) advanced (JobRegisterParamSpec attribute) alias (LicenseInstance attribute) alloc_output() (ExternalJobController method) allocate() (Dataset class method) AllocatedResources (class in cryosparc.models.job) allowed (JobRegisterParamSpec attribute) allowed_prefixes (FileBrowserPrefixes attribute) amp_contrast (CTF attribute) (LivePreprocessingParams attribute) ancestors (WorkspaceAncestorUidsResponse attribute) ancestors_of_final_results (GetFinalResultsResponse attribute) AnyContentType (in module cryosparc.spec) AnyFormat (in module cryosparc.spec) anyOf (JobRegisterParamSpec attribute) api (CryoSPARC attribute) api_default() (in module cryosparc.json_util) api_encode() (in module cryosparc.json_util) api_object_hook() (in module cryosparc.json_util) api_schema() (Streamable class method) API_SUFFIX (in module cryosparc.constants) APIClient (class in cryosparc.api) APIError append() (Dataset method) append_many() (Dataset class method) apply_blueprint() (BlueprintsAPI method) apply_configuration_profile() (SessionsAPI method) apply_workflow() (WorkflowsAPI method) AppSession (class in cryosparc.models.api_request) archive() (ProjectsAPI method) archived (Project attribute) AssetContentType (in module cryosparc.spec) AssetFormat (in module cryosparc.spec) assets (APIClient attribute) AssetsAPI (class in cryosparc.api) astigmatism (ExposureAttributes attribute) astigmatism_angle (ExposureAttributes attribute) AsyncBinaryIterator (class in cryosparc.stream) AsyncBinaryIteratorIO (class in cryosparc.stream) AsyncReadable (class in cryosparc.stream) AsyncWritable (class in cryosparc.stream) attach() (ProjectsAPI method) attach_status (Job attribute) attributes (Exposure attribute) (Session attribute) audit_dump() (InstanceAPI method) Auth (in module cryosparc.api) AuthSession (class in cryosparc.auth) auto_pause (RunConfiguration attribute) (Session attribute) auto_pause_after_idle_minutes (RunConfiguration attribute) (Session attribute) autodump_errors (Project attribute) autodump_failed (Project attribute) auxiliary_gpus (LiveComputeResources attribute) auxiliary_lane (LiveComputeResources attribute) auxiliary_ssd (LiveComputeResources attribute) avail_mb (CheckpointEvent attribute) (Event attribute) (ImageEvent attribute) (InteractiveEvent attribute) (TextEvent attribute) available_memory (InstanceInformation attribute) average_defocus (ExposureAttributes attribute) average_manual_picks (SessionStats attribute) avg_movies_accepted_per_hour (SessionStats attribute) avg_movies_found_per_hour (SessionStats attribute) avg_movies_ready_per_hour (SessionStats attribute) avg_particles_extracted_per_hour (SessionStats attribute) avg_particles_extracted_per_mic (SessionStats attribute) B back_path (BrowseFileResponse attribute) background_blob (ExposureElement attribute) base_path (BrowseFile attribute) base_url (CryoSPARC attribute) bcrypt (PasswordService attribute) beam_shift (MScopeParams attribute) beam_shift_known (MScopeParams attribute) bench (Job attribute) bench_timings (Job attribute) benchmarks (APIClient attribute) BenchmarksAPI (class in cryosparc.api) bfactor (LivePreprocessingParams attribute) bin_size_pix (LivePreprocessingParams attribute) binary_to_json() (in module cryosparc.json_util) BinaryIteratorIO (class in cryosparc.stream) binfactor (StatBlob attribute) blob_angular_spacing_deg (LivePreprocessingParams attribute) blob_diameter_max (LivePreprocessingParams attribute) blob_diameter_min (LivePreprocessingParams attribute) blob_lowpass_res (LivePreprocessingParams attribute) blob_lowpass_res_template (LivePreprocessingParams attribute) blob_max_num_hits (LivePreprocessingParams attribute) blob_min_distance (LivePreprocessingParams attribute) blob_ncc_score (PickingThresholds attribute) blob_num_plot (LivePreprocessingParams attribute) blob_num_process (LivePreprocessingParams attribute) blob_pick_score_median (ExposureAttributes attribute) blob_power (PickingThresholds attribute) blob_use_ctf (LivePreprocessingParams attribute) blueprints (APIClient attribute) BlueprintsAPI (class in cryosparc.api) Bookmark (class in cryosparc.models.user) bookmarks (FileBrowserState attribute) bopen() (in module cryosparc.util) box_size_pix (LivePreprocessingParams attribute) browse_files() (InstanceAPI method) BrowseFile (class in cryosparc.models.file_browser) BrowseFileResponse (class in cryosparc.models.file_browser) browserPath (UserState attribute) build_errors (Job attribute) BuilderTag (in module cryosparc.models.job_spec) bus_id (GpuInfo attribute) C cache (APIClient attribute) cache_path (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) cache_quota_mb (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) cache_reserve_mb (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) CacheAPI (class in cryosparc.api) categories (JobRegister attribute) Category (in module cryosparc.models.job_spec) category (JobRegisterJobSpec attribute) (JobSearch attribute) center_x_frac (PickerLocations attribute) center_y_frac (PickerLocations attribute) check_at (ExposureAttributes attribute) check_directory() (ProjectsAPI method) check_finalized() (in module cryosparc.registry) CheckpointEvent (class in cryosparc.models.event) children (Job attribute) chunkSize (GridFSFile attribute) claim_all_instance_ownership() (ProjectsAPI method) claim_instance_ownership() (ProjectsAPI method) class2D_K (LiveClass2DParams attribute) class2D_max_res (LiveClass2DParams attribute) class2D_window_inner_A (LiveClass2DParams attribute) class_2D_new (GenerateIntermediateResultsSettings attribute) class_3D (GenerateIntermediateResultsSettings attribute) class_ess (TemplateClassInfo attribute) class_idx (TemplateClassInfo attribute) classic_mode (LivePreprocessingParams attribute) cleanup_data() (ProjectsAPI method) clear() (JobController method) (JobsAPI method) clear_cached_property() (in module cryosparc.util) clear_default_param() (ProjectsAPI method) clear_intermediate_results() (JobsAPI method) (ProjectsAPI method) (WorkspacesAPI method) clear_many() (JobsAPI method) clear_param() (JobsAPI method) clear_phase2_abinit() (SessionsAPI method) clear_phase2_class2D() (SessionsAPI method) clear_phase2_refine() (SessionsAPI method) clear_session() (SessionsAPI method) clear_template_creation_class2D() (SessionsAPI method) cleared_at (Session attribute) clone() (JobsAPI method) (SessionsAPI method) clone_chain() (JobsAPI method) clone_many() (JobsAPI method) cloned_from (Job attribute) Cluster (class in cryosparc.models.scheduler_target) cluster_job_custom_vars (Job attribute) cluster_job_id (Job attribute) cluster_job_monitor_event_id (Job attribute) cluster_job_monitor_last_run_at (Job attribute) cluster_job_monitor_retries (Job attribute) cluster_job_status (Job attribute) cluster_job_status_code (Job attribute) cluster_job_submission_script (Job attribute) color (Bookmark attribute) (JobGroup attribute) colour (Tag attribute) cols() (Dataset method) Column (class in cryosparc.dataset.column) commercial_instance (LicenseInstance attribute) common_fields() (Dataset class method) compact_session() (SessionsAPI method) compacted_exposures_count (Session attribute) completed_at (Job attribute) (JobSearch attribute) (Session attribute) completed_count (Job attribute) components (InteractiveEvent attribute) (InteractiveImgfile attribute) compressed_fields (DatasetHeader attribute) compression (DatasetHeader attribute) compute_mode (GpuInfo attribute) compute_resources (Session attribute) (SessionConfigProfile attribute) (SessionConfigProfileBody attribute) compute_use_ssd (LiveClass2DParams attribute) computed_stats_last_run_time (Session attribute) config (APIClient attribute) (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) ConfigAPI (class in cryosparc.api) configure_auto_pause() (SessionsAPI method) connect() (ExternalJobController method) (JobController method) (JobsAPI method) connect_result() (JobController method) (JobsAPI method) Connection (class in cryosparc.models.job_spec) connection (ExternalOutputSpec attribute) connections (Input attribute) contentType (GridFSFile attribute) copy() (Dataset method) copy_fields() (Dataset method) count (ImportSignature attribute) (ParticleInfo attribute) (ParticleManual attribute) (Phase2ParticleOutputInfo attribute) (PickerInfoElement attribute) count() (ExposuresAPI method) (JobsAPI method) (ProjectsAPI method) (SessionsAPI method) (UsersAPI method) (WorkspacesAPI method) count_max (Input attribute) (InputSpec attribute) count_min (Input attribute) (InputSpec attribute) counts (Tag attribute) cp() (CryoSPARC method) (JobController method) (ProjectController method) (ProjectsAPI method) CPU (ResourceSlots attribute) cpu (ResourceSpec attribute) cpu_model (InstanceInformation attribute) cpumem_mb (CheckpointEvent attribute) (Event attribute) (ImageEvent attribute) (InteractiveEvent attribute) (TextEvent attribute) create() (JobsAPI method) (ProjectsAPI method) (SessionsAPI method) (TagsAPI method) (UsersAPI method) (WorkspacesAPI method) create_and_enqueue_export_exposures() (SessionsAPI method) create_and_enqueue_export_particles() (SessionsAPI method) create_blueprint() (BlueprintsAPI method) create_configuration_profile() (SessionsAPI method) create_exposure_group() (SessionsAPI method) create_external_job() (CryoSPARC method) (ProjectController method) (WorkspaceController method) create_external_result() (JobsAPI method) create_job() (CryoSPARC method) (ProjectController method) (WorkspaceController method) create_workflow() (WorkflowsAPI method) create_workspace() (CryoSPARC method) (ProjectController method) created_at (Bookmark attribute) (CheckpointEvent attribute) (Event attribute) (Exposure attribute) (ImageEvent attribute) (InteractiveEvent attribute) (Job attribute) (JobRegister attribute) (JobSearch attribute) (Notification attribute) (PerformanceBenchmark attribute) (Project attribute) (ReferencePerformanceBenchmark attribute) (Session attribute) (SessionConfigProfile attribute) (Tag attribute) (TextEvent attribute) (User attribute) (Workspace attribute) created_at_version (Project attribute) created_by_job_uid (Job attribute) (Session attribute) (Workspace attribute) created_by_user_id (Job attribute) (Session attribute) (SessionConfigProfile attribute) (Tag attribute) (User attribute) (Workspace attribute) created_by_workflow (Tag attribute) cross_corr (CtfStats attribute) cross_corr_ctffind4 (CTF attribute) cryosparc module CryoSPARC (class in cryosparc.tools) cryosparc.api module cryosparc.auth module cryosparc.cli module cryosparc.constants module cryosparc.controllers module cryosparc.controllers.job module cryosparc.controllers.project module cryosparc.controllers.workspace module cryosparc.dataset module cryosparc.dataset.column module cryosparc.dataset.core module cryosparc.dataset.dtype module cryosparc.dataset.row module cryosparc.errors module cryosparc.json_util module cryosparc.model_registry module cryosparc.models module cryosparc.models.api_request module cryosparc.models.api_response module cryosparc.models.asset module cryosparc.models.auth module cryosparc.models.benchmarks module cryosparc.models.config module cryosparc.models.diagnostics module cryosparc.models.event module cryosparc.models.exposure module cryosparc.models.external module cryosparc.models.file_browser module cryosparc.models.gpu module cryosparc.models.instance module cryosparc.models.job module cryosparc.models.job_register module cryosparc.models.job_spec module cryosparc.models.license module cryosparc.models.notification module cryosparc.models.params module cryosparc.models.preview module cryosparc.models.project module cryosparc.models.resource module cryosparc.models.scheduler_lane module cryosparc.models.scheduler_target module cryosparc.models.service module cryosparc.models.services module cryosparc.models.session module cryosparc.models.session_config_profile module cryosparc.models.session_params module cryosparc.models.session_spec module cryosparc.models.signature module cryosparc.models.tag module cryosparc.models.user module cryosparc.models.when module cryosparc.models.workspace module cryosparc.mrc module cryosparc.platform module cryosparc.registry module cryosparc.search module cryosparc.spec module cryosparc.star module cryosparc.stream module cryosparc.stream_registry module cryosparc.tools module cryosparc.util module cryosparc_patch (RuntimeDiagnostics attribute) cryosparc_version (PerformanceBenchmark attribute) (ReferencePerformanceBenchmark attribute) (RuntimeDiagnostics attribute) cs_mm (CTF attribute) (LivePreprocessingParams attribute) (MScopeParams attribute) CSDAT_FORMAT (in module cryosparc.dataset) CTF (class in cryosparc.models.exposure) ctf (ExposureElement attribute) ctf_at (ExposureAttributes attribute) ctf_fit_to_A (CTF attribute) (CtfStats attribute) (ExposureAttributes attribute) ctf_override_K_X (LivePreprocessingParams attribute) ctf_override_K_Y (LivePreprocessingParams attribute) ctf_res_max_align (LivePreprocessingParams attribute) ctf_res_min_align (LivePreprocessingParams attribute) ctf_stats (ExposureElement attribute) CtfStats (class in cryosparc.models.exposure) ctx (JobBuildError attribute) CUDA_version (InstanceInformation attribute) current_in_use (LicenseInstance attribute) current_pcie_link_gen (GpuInfo attribute) current_picker (LivePreprocessingParams attribute) custom_var_names (Cluster attribute) custom_vars (Cluster attribute) D data_management (Session attribute) Datafield (class in cryosparc.spec) datafile (InteractiveEvent attribute) DataManagementStat (class in cryosparc.models.session) DataManagementStats (class in cryosparc.models.session) Dataset (class in cryosparc.dataset) DatasetContentType (in module cryosparc.spec) DatasetFormat (in module cryosparc.spec) DatasetHeader (class in cryosparc.dataset.dtype) DatasetLoadError datatype (Header attribute) Datatype (in module cryosparc.spec) date_generated (RuntimeDiagnostics attribute) db_stats (RuntimeDiagnostics attribute) deactivate_notification() (NotificationsAPI method) default (JobRegisterParamSpec attribute) DEFAULT_FORMAT (in module cryosparc.dataset) default_max_licenses_available (LicenseInstance attribute) default_rng() (in module cryosparc.util) defaultJobPriority (UserState attribute) defect_path (ExposureGroup attribute) (ExposureGroupUpdate attribute) (MScopeParams attribute) defocus_range (ExposureAttributes attribute) delete (DeleteWorkspacePreview attribute) delete() (JobsAPI method) (ProjectsAPI method) (SessionsAPI method) (TagsAPI method) (UsersAPI method) (WorkspacesAPI method) delete_blueprint() (BlueprintsAPI method) delete_configuration_profile() (SessionsAPI method) delete_exposure_group() (SessionsAPI method) delete_many() (JobsAPI method) delete_output_result_files() (JobsAPI method) delete_workflow() (WorkflowsAPI method) deleted (Exposure attribute) (Job attribute) (Project attribute) (Session attribute) (Workspace attribute) deleted_at (Job attribute) DeleteJobPreview (class in cryosparc.models.preview) DeleteProjectPreview (class in cryosparc.models.preview) DeleteProjectWorkspacePreview (class in cryosparc.models.preview) DeleteWorkspacePreview (class in cryosparc.models.preview) deleting (Job attribute) (Project attribute) (Session attribute) (Workspace attribute) desc (JobController property) (ProjectController property) (SchedulerLane attribute) (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) (WorkspaceController property) descendant_job_uids (KeepJobPreview attribute) descendant_workspace_uids (KeepJobPreview attribute) descendants (WorkspaceDescendantUidsResponse attribute) descr() (Dataset method) description (Bookmark attribute) (Input attribute) (InputSpec attribute) (Job attribute) (JobGroup attribute) (JobRegisterJobSpec attribute) (JobRegisterParamSpec attribute) (Output attribute) (OutputSpec attribute) (ParamSection attribute) (Project attribute) (Session attribute) (Tag attribute) (Workspace attribute) detach() (ProjectsAPI method) detached (Project attribute) developer (APIClient attribute) DeveloperAPI (class in cryosparc.api) df1_A (CTF attribute) df2_A (CTF attribute) df_angle_rad (CTF attribute) df_range (CtfStats attribute) df_search_max (LivePreprocessingParams attribute) df_search_min (LivePreprocessingParams attribute) df_tilt_angle (ExposureAttributes attribute) df_tilt_normal (CtfStats attribute) diag_image_path (CtfStats attribute) dir (JobController property) (ProjectController property) direction (TemplateSelectionThreshold attribute) disconnect() (JobController method) (JobsAPI method) disconnect_all() (JobsAPI method) disconnect_result() (JobController method) (JobsAPI method) discovered_at (Exposure attribute) do_phase_shift_refine_only (LivePreprocessingParams attribute) do_phase_shift_search_refine (LivePreprocessingParams attribute) do_plotting (LivePreprocessingParams attribute) download() (AssetsAPI method) (CryoSPARC method) (JobController method) (ProjectController method) download_asset() (CryoSPARC method) (JobController method) download_dataset() (CryoSPARC method) (JobController method) (ProjectController method) download_file() (CryoSPARC method) (JobController method) (ProjectController method) (ProjectsAPI method) download_mrc() (CryoSPARC method) (JobController method) (ProjectController method) downsample() (in module cryosparc.tools) driver_version (GpuInfo attribute) (InstanceInformation attribute) drop_fields() (Dataset method) DsetType (class in cryosparc.dataset.core) DT (class in cryosparc.mrc) dtype (DatasetHeader attribute) DType (in module cryosparc.spec) dtype (InputResult attribute) (InputSlot attribute) (OutputResult attribute) (OutputSlot attribute) (Slot attribute) dumped_at (Job attribute) (Project attribute) (Session attribute) (Workspace attribute) E ecl (Exposure attribute) (Session attribute) ecl_enabled() (InstanceAPI method) edit_blueprint() (BlueprintsAPI method) edit_workflow() (WorkflowsAPI method) eer_numfractions (LivePreprocessingParams attribute) eer_upsampfactor (LivePreprocessingParams attribute) EIGHT_MIB (in module cryosparc.constants) elapsed_time (Session attribute) Email (class in cryosparc.models.user) emails (User attribute) enable_bench (Job attribute) enqueue() (JobsAPI method) enqueue_phase2_abinit() (SessionsAPI method) enqueue_phase2_class2D() (SessionsAPI method) enqueue_phase2_refine() (SessionsAPI method) enum (JobRegisterParamSpec attribute) errmesg (BrowseFile attribute) error (JobRegister attribute) errors (RtpWorkerState attribute) (Session attribute) errors_run (Job attribute) Event (class in cryosparc.models.event) examples (JobRegisterParamSpec attribute) exists (ProjectSymlink attribute) exp_group_id (CTF attribute) (Exposure attribute) (ExposureGroup attribute) (MScopeParams attribute) exp_groups (SessionConfigProfile attribute) (SessionConfigProfileBody attribute) export_job() (JobsAPI method) export_output_results() (JobsAPI method) export_session() (SessionsAPI method) exported_at (JobSearch attribute) Exposure (class in cryosparc.models.exposure) exposure (ExposureGroups attribute) exposure_groups (Session attribute) exposure_processing_priority (RunConfiguration attribute) (Session attribute) exposure_summary (Session attribute) ExposureAttributes (class in cryosparc.models.exposure) ExposureElement (class in cryosparc.models.exposure) ExposureGroup (class in cryosparc.models.session) ExposureGroups (class in cryosparc.models.exposure) ExposureGroupUpdate (class in cryosparc.models.session) exposures (APIClient attribute) ExposuresAPI (class in cryosparc.api) expr (When attribute) extend() (Dataset method) external (APIClient attribute) ExternalAPI (class in cryosparc.api) ExternalJobController (class in cryosparc.controllers.job) ExternalJobError ExternalOutputSpec (class in cryosparc.models.external) extract_at (ExposureAttributes attribute) extract_f16 (LivePreprocessingParams attribute) F fail_count (Exposure attribute) fail_reason (Exposure attribute) failed (Exposure attribute) failed_at (Job attribute) (JobSearch attribute) (Session attribute) Field (in module cryosparc.spec) field (TemplateSelectionThreshold attribute) fields (ParticleInfo attribute) (ParticleManual attribute) (Phase2ParticleOutputInfo attribute) (PickerInfoElement attribute) fields() (Dataset method) fig_of_merit_gctf (CTF attribute) file_browser_settings (User attribute) file_engine_enable (ExposureGroup attribute) (ExposureGroupUpdate attribute) file_engine_filter (ExposureGroup attribute) (ExposureGroupUpdate attribute) file_engine_interval (ExposureGroup attribute) (ExposureGroupUpdate attribute) file_engine_last_run (Session attribute) file_engine_min_file_size (ExposureGroup attribute) (ExposureGroupUpdate attribute) file_engine_min_modified_time_delta (ExposureGroup attribute) (ExposureGroupUpdate attribute) file_engine_recursive (ExposureGroup attribute) (ExposureGroupUpdate attribute) file_engine_status (Session attribute) file_engine_strategy (ExposureGroup attribute) file_engine_watch_path_abs (ExposureGroup attribute) (ExposureGroupUpdate attribute) file_name (BrowseFile attribute) FileBrowserPrefixes (class in cryosparc.models.file_browser) FileBrowserState (class in cryosparc.models.user) fileid (GridFSAsset attribute) (InteractiveGridFSAsset attribute) (LiveVolumeInfo attribute) (TemplateClassInfo attribute) (UiTileImage attribute) filename (GridFSAsset attribute) (GridFSFile attribute) (InteractiveGridFSAsset attribute) FileOrFigure (in module cryosparc.controllers.job) files (BrowseFileResponse attribute) filetype (GridFSAsset attribute) (InteractiveGridFSAsset attribute) filter_fields() (Dataset method) filter_prefix() (Dataset method) filter_prefixes() (Dataset method) final (ExposureGroup attribute) final_results (GetFinalResultsResponse attribute) finalize() (in module cryosparc.registry) finalize_exposure_group() (SessionsAPI method) find() (AssetsAPI method) (ExposuresAPI method) (InstanceAuthSessions method) (JobsAPI method) (ProjectsAPI method) (SessionsAPI method) (TagsAPI method) (WorkspacesAPI method) find_ancestor_uids() (JobsAPI method) find_cluster() (ResourcesAPI method) find_cluster_script() (ResourcesAPI method) find_cluster_template_custom_vars() (ResourcesAPI method) find_cluster_template_vars() (ResourcesAPI method) find_clusters() (ResourcesAPI method) find_descendant_uids() (JobsAPI method) find_exposure_group() (SessionsAPI method) find_exposure_groups() (SessionsAPI method) find_external_job() (CryoSPARC method) (ProjectController method) find_job() (CryoSPARC method) (ProjectController method) (WorkspaceController method) find_jobs() (CryoSPARC method) (ProjectController method) (WorkspaceController method) find_lane() (ResourcesAPI method) find_lanes() (ResourcesAPI method) find_node() (ResourcesAPI method) find_nodes() (ResourcesAPI method) find_one() (AssetsAPI method) (ExposuresAPI method) (JobsAPI method) (ProjectsAPI method) (SessionsAPI method) (UsersAPI method) (WorkspacesAPI method) find_output_result() (JobsAPI method) find_project() (CryoSPARC method) find_projects() (CryoSPARC method) find_target_by_hostname() (ResourcesAPI method) find_target_by_name() (ResourcesAPI method) find_targets() (ResourcesAPI method) find_workspace() (CryoSPARC method) (ProjectController method) find_workspace_ancestor_uids() (WorkspacesAPI method) find_workspace_descendant_uids() (WorkspacesAPI method) find_workspaces() (CryoSPARC method) (ProjectController method) first() (in module cryosparc.util) first_name (User attribute) fit_data_path (CtfStats attribute) fixed (AllocatedResources attribute) FixedResourceSlots (class in cryosparc.models.resource) flags (CheckpointEvent attribute) (Event attribute) (ImageEvent attribute) (InteractiveEvent attribute) (TextEvent attribute) flip_x (GainRefBlob attribute) flip_y (GainRefBlob attribute) format (JobRegisterParamSpec attribute) (JobRegisterParamTypeSpec attribute) (MicrographBlob attribute) (MovieBlob attribute) found_at (ExposureAttributes attribute) frame_end (LivePreprocessingParams attribute) (MotionData attribute) frame_start (LivePreprocessingParams attribute) (MotionData attribute) frames (SessionStats attribute) from_async_stream() (Dataset class method) (Stream class method) (Streamable class method) full_spec (JobController property) G gain_ref_blob (ExposureElement attribute) gainref_flip_x (LivePreprocessingParams attribute) gainref_flip_y (LivePreprocessingParams attribute) gainref_path (ExposureGroup attribute) (ExposureGroupUpdate attribute) gainref_rotate_num (LivePreprocessingParams attribute) GainRefBlob (class in cryosparc.models.exposure) ge (JobRegisterParamSpec attribute) generate_intermediate_results_settings (Project attribute) generate_new_uid() (InstanceAPI method) generate_uids() (in module cryosparc.dataset) GenerateIntermediateResultsSettings (class in cryosparc.models.project) get() (CacheAPI method) (ConfigAPI method) get_active_count() (JobsAPI method) get_active_licenses_count() (JobsAPI method) get_benchmark() (BenchmarksAPI method) get_categories() (JobsAPI method) get_chain() (JobsAPI method) get_changelog() (ExternalAPI method) get_configuration_profiles() (SessionsAPI method) get_directory() (JobsAPI method) (ProjectsAPI method) get_discuss_categories() (ExternalAPI method) get_discuss_top() (ExternalAPI method) get_emdb_latest_entries() (ExternalAPI method) get_empiar_latest_entries() (ExternalAPI method) get_event_logs() (JobsAPI method) get_exposure_format() (in module cryosparc.tools) get_file_browser_settings() (ConfigAPI method) (UsersAPI method) get_final_results() (JobsAPI method) get_generate_intermediate_results_job_types() (ProjectsAPI method) get_generate_intermediate_results_settings() (ProjectsAPI method) get_import_signatures() (in module cryosparc.tools) get_include() (in module cryosparc) get_individual_picks() (ExposuresAPI method) get_instance_uid() (ConfigAPI method) get_job_register() (ProjectsAPI method) get_job_sections() (CryoSPARC method) get_lanes() (CryoSPARC method) (UsersAPI method) get_license_usage() (InstanceAPI method) get_literal_module_name() (in module cryosparc.registry) get_log() (JobsAPI method) get_log_path() (JobsAPI method) get_my_state_var() (UsersAPI method) get_next_exposure_group_id() (ProjectsAPI method) get_output_fields() (JobsAPI method) get_output_result_path() (JobsAPI method) get_owner_id() (ProjectsAPI method) get_random_subset() (Spool method) get_reference_benchmarks() (BenchmarksAPI method) get_role() (UsersAPI method) get_runtime_diagnostics() (InstanceAPI method) get_service_log() (InstanceAPI method) get_session_base_params() (SessionsAPI method) get_state_var() (UsersAPI method) get_status() (JobsAPI method) get_symlinks() (ProjectsAPI method) get_system_info() (ConfigAPI method) get_tag_count_by_type() (TagsAPI method) get_tags_by_type() (TagsAPI method) get_targets() (CryoSPARC method) get_title_slug() (ProjectsAPI method) get_tutorials() (ExternalAPI method) get_types() (JobsAPI method) get_update_tag() (InstanceAPI method) get_version() (ConfigAPI method) GetFinalResultsResponse (class in cryosparc.models.api_response) Gpu (class in cryosparc.models.gpu) GPU (ResourceSlots attribute) gpu (ResourceSpec attribute) gpu_bus_id (PerformanceBenchmark attribute) (ReferencePerformanceBenchmark attribute) gpu_info (InstanceInformation attribute) gpu_name (PerformanceBenchmark attribute) (ReferencePerformanceBenchmark attribute) gpu_utilization (GpuInfo attribute) GpuInfo (class in cryosparc.models.gpu) gpus (Node attribute) GridFSAsset (class in cryosparc.models.asset) GridFSFile (class in cryosparc.models.asset) group_id (LicenseInstance attribute) GROUP_NAME_PATTERN (in module cryosparc.controllers.job) groups (Exposure attribute) (Session attribute) (Workspace attribute) gsfsc (SessionStats attribute) gt (JobRegisterParamSpec attribute) H handle() (Dataset method) has_defect_file (MovieBlob attribute) has_error (Job attribute) has_warning (Job attribute) hashcache (class in cryosparc.util) hashedToken (LoginToken attribute) Header (class in cryosparc.mrc) health() (APIClient method) heartbeat_at (Job attribute) Hello (class in cryosparc.models.api_response) hidden (JobRegisterJobSpec attribute) (JobRegisterParamSpec attribute) hide (Notification attribute) hostname (AllocatedResources attribute) (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) hw_power_limit (GpuInfo attribute) I ice_thickness_rel (CtfStats attribute) (ExposureAttributes attribute) icon (Notification attribute) id (Bookmark attribute) (CheckpointEvent attribute) (Event attribute) (Exposure attribute) (Gpu attribute) (GpuInfo attribute) (GridFSFile attribute) (ImageEvent attribute) (InteractiveEvent attribute) (Job attribute) (JobGroup attribute) (JobRegister attribute) (JobWorkflowInfo attribute) (LicenseInstance attribute) (Notification attribute) (PerformanceBenchmark attribute) (Project attribute) (ReferencePerformanceBenchmark attribute) (Session attribute) (SessionConfigProfile attribute) (Tag attribute) (TextEvent attribute) (User attribute) (Workspace attribute) idx (GainRefBlob attribute) (MicrographBlob attribute) (MotionData attribute) (StatBlob attribute) ignore_exposures (ExposureGroup attribute) (ExposureGroupUpdate attribute) image (Output attribute) ImageContentType (in module cryosparc.spec) ImageEvent (class in cryosparc.models.event) ImageFormat (in module cryosparc.spec) imgfiles (ImageEvent attribute) (InteractiveImgfile attribute) import_dir_default (FileBrowserPrefixes attribute) import_job() (JobsAPI method) import_result_group() (JobsAPI method) import_sig (MovieBlob attribute) import_signatures (Session attribute) import_status (Job attribute) (Project attribute) imported_at (Job attribute) (Project attribute) (Session attribute) (Workspace attribute) ImportSignature (class in cryosparc.models.signature) in_progress (Exposure attribute) innerjoin() (Dataset method) innerjoin_many() (Dataset class method) Input (class in cryosparc.models.job_spec) input (JobBuildError attribute) (SessionBuildError attribute) input_type (JobBuildError attribute) (SessionBuildError attribute) InputResult (class in cryosparc.models.job_spec) Inputs (class in cryosparc.models.job_spec) inputs (JobController property) (JobRegisterJobSpec attribute) (JobSpec attribute) InputSlot (class in cryosparc.models.job_spec) InputSpec (class in cryosparc.models.job_spec) InputSpecs (class in cryosparc.models.job_spec) insert() (InstanceAuthSessions method) inspect() (Dataset class method) instance (APIClient attribute) instance_information (Job attribute) (PerformanceBenchmark attribute) (ReferencePerformanceBenchmark attribute) (RuntimeDiagnostics attribute) (SchedulerTargetInformation attribute) InstanceAPI (class in cryosparc.api) InstanceAuthSessions (class in cryosparc.auth) InstanceInformation (class in cryosparc.models.instance) interact() (JobController method) interactive (JobRegisterJobSpec attribute) interactive_port (Job attribute) interactive_post() (JobsAPI method) InteractiveEvent (class in cryosparc.models.event) InteractiveGridFSAsset (class in cryosparc.models.event) InteractiveImgfile (class in cryosparc.models.event) interlace() (Dataset method) intermediate_results_size_bytes (Job attribute) intermediate_results_size_last_updated (Job attribute) is_ancestor_of_final_result (Job attribute) is_any_eer (ExposureGroup attribute) is_background_subtracted (MicrographBlob attribute) is_cleanup_in_progress (Project attribute) is_db_auth_enabled (SystemInfo attribute) is_equivalent() (Dataset method) is_experiment (Job attribute) is_final_result (Job attribute) is_gain_corrected (MovieBlob attribute) is_gracefully_pausing (Session attribute) is_hidden (BrowseFile attribute) is_link (BrowseFile attribute) is_localhost() (in module cryosparc.platform) items (JobRegisterParamSpec attribute) J Job (class in cryosparc.models.job) job (TagCounts attribute) job_count (ProjectStats attribute) (WorkspaceStats attribute) job_dir (Job attribute) job_dir_size (Job attribute) job_dir_size_last_updated (Job attribute) job_params (PerformanceBenchmark attribute) (ReferencePerformanceBenchmark attribute) job_register (CryoSPARC property) job_register() (APIClient method) job_sections (ProjectStats attribute) (WorkspaceStats attribute) job_sig (Job attribute) job_status (Notification attribute) (ProjectStats attribute) (WorkspaceStats attribute) job_types (ProjectStats attribute) (WorkspaceStats attribute) job_uid (CheckpointEvent attribute) (Connection attribute) (Event attribute) (GridFSFile attribute) (ImageEvent attribute) (InputResult attribute) (InteractiveEvent attribute) (Notification attribute) (OutputRef attribute) (PerformanceBenchmark attribute) (RecentJob attribute) (TextEvent attribute) JobBuildError (class in cryosparc.models.job_spec) JobController (class in cryosparc.controllers.job) JobGroup (class in cryosparc.models.workspace) jobId (JobWorkflowInfo attribute) JobLastAccessed (class in cryosparc.models.job) JobRegister (class in cryosparc.models.job_register) JobRegisterError (class in cryosparc.models.job_spec) JobRegisterJobSpec (class in cryosparc.models.job_register) JobRegisterParamSpec (class in cryosparc.models.job_register) JobRegisterParamTypeSpec (class in cryosparc.models.job_register) jobs (APIClient attribute) (DeleteProjectPreview attribute) (DeleteWorkspacePreview attribute) (JobGroup attribute) JobsAPI (class in cryosparc.api) JobSearch (class in cryosparc.search) JobSection (class in cryosparc.spec) JobSpec (class in cryosparc.models.job_spec) JobWorkflowInfo (class in cryosparc.models.job) K keep (DeleteWorkspacePreview attribute) KeepJobPreview (class in cryosparc.models.preview) keycloak_login() (APIClient method) kill() (ExternalJobController method) (JobController method) (JobsAPI method) killed_at (Job attribute) (JobSearch attribute) L labels (JobRegisterParamSpec attribute) lane (AllocatedResources attribute) (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) lane_type (AllocatedResources attribute) lanes (User attribute) last_accessed (Bookmark attribute) (Job attribute) (Project attribute) (RecentPath attribute) (Session attribute) (Workspace attribute) last_applied_at (SessionConfigProfile attribute) last_archived_version (Project attribute) last_compacted_amount (Session attribute) last_compacted_at (Session attribute) last_compacted_version (Session attribute) last_detached_version (Project attribute) last_dumped_version (Job attribute) (Project attribute) (Session attribute) (Workspace attribute) last_exp_group_id_used (Project attribute) last_exported_at (Job attribute) last_exported_location (Job attribute) last_exported_version (Job attribute) last_intermediate_data_cleared_amount (Job attribute) last_intermediate_data_cleared_at (Job attribute) last_name (User attribute) last_password_changed_at (User attribute) last_processed_exposure_priority (Session attribute) last_restored_amount (Session attribute) last_restored_at (Session attribute) last_scheduled_at (Job attribute) latest_summary_stats (Output attribute) latest_workflow_uid (ProjectWorkflowInfo attribute) launched_at (Job attribute) le (JobRegisterParamSpec attribute) legacy_name (JobRegisterParamSpec attribute) length (DatasetHeader attribute) (GridFSFile attribute) license_developer (LicenseInstance attribute) license_live_enabled (LicenseInstance attribute) LICENSE_REGEX (in module cryosparc.tools) licenseAccepted (UserState attribute) LicenseInstance (class in cryosparc.models.license) licenses_acquired (AllocatedResources attribute) lightweight (JobRegisterJobSpec attribute) link_path (BrowseFile attribute) link_to_workspace() (JobsAPI method) list_assets() (CryoSPARC method) (JobController method) list_files() (CryoSPARC method) (JobController method) (ProjectController method) live_enabled() (InstanceAPI method) live_session_job_uid (Session attribute) LiveAbinitParams (class in cryosparc.models.session_params) LiveClass2DParams (class in cryosparc.models.session_params) LiveComputeResources (class in cryosparc.models.session) LivePreprocessingParams (class in cryosparc.models.session_params) LiveRefineParams (class in cryosparc.models.session_params) LiveVolumeInfo (class in cryosparc.models.session) load() (Dataset class method) (InstanceAuthSessions class method) (Stream class method) (Streamable class method) load_input() (JobController method) (JobsAPI method) load_output() (JobController method) (JobsAPI method) LoadableSlots (in module cryosparc.spec) loc (JobBuildError attribute) (SessionBuildError attribute) location (ParticleManual attribute) log() (JobController method) log_checkpoint() (JobController method) log_plot() (JobController method) LoggingService (in module cryosparc.models.service) (in module cryosparc.models.services) login() (APIClient method) (in module cryosparc.cli) LoginService (class in cryosparc.models.user) LoginToken (class in cryosparc.models.user) loginTokens (LoginService attribute) LogLevel (in module cryosparc.controllers.job) lowpass2() (in module cryosparc.tools) ls() (ProjectsAPI method) lt (JobRegisterParamSpec attribute) M make_batches() (Spool method) manual_extract_at (ExposureAttributes attribute) manual_ncc_score (PickingThresholds attribute) manual_power (PickingThresholds attribute) manual_reject (Exposure attribute) manual_reject_exposure() (ExposuresAPI method) manual_rejected (SessionStats attribute) manual_unreject_exposure() (ExposuresAPI method) mark_completed() (JobsAPI method) mark_failed() (ExposuresAPI method) (JobsAPI method) mark_running() (JobsAPI method) mark_session_completed() (SessionsAPI method) mask() (Dataset method) master_hostname (SystemInfo attribute) max (RangeThreshold attribute) (SessionAttribute attribute) (Threshold attribute) max_cpu_freq (InstanceInformation attribute) max_intra_frame_motion (ExposureAttributes attribute) max_licenses_available (LicenseInstance attribute) max_pcie_link_gen (GpuInfo attribute) max_timestamps (Session attribute) max_value (RangeThreshold attribute) me() (UsersAPI method) mean_prob (TemplateClassInfo attribute) media_type (Dataset attribute) (Streamable attribute) mem (Gpu attribute) (GpuInfo attribute) memory_utilization (GpuInfo attribute) message (JobRegisterError attribute) (Notification attribute) (RunError attribute) (UpdateTag attribute) meta (CheckpointEvent attribute) (Event attribute) (ImageEvent attribute) (InteractiveEvent attribute) (TextEvent attribute) metadata (DataManagementStats attribute) metafiles (OutputResult attribute) micrograph_blob (ExposureElement attribute) micrograph_blob_non_dw (ExposureElement attribute) micrograph_blob_thumb (ExposureElement attribute) micrograph_psize (Exposure attribute) micrograph_shape (Exposure attribute) MicrographBlob (class in cryosparc.models.exposure) MicrographContentType (in module cryosparc.spec) MicrographFormat (in module cryosparc.spec) micrographs (DataManagementStats attribute) min (RangeThreshold attribute) (SessionAttribute attribute) (Threshold attribute) min_reserved_licenses (LicenseInstance attribute) min_value (RangeThreshold attribute) mkdir() (CryoSPARC method) (JobController method) (ProjectController method) (ProjectsAPI method) model (JobController attribute) (ProjectController attribute) (WorkspaceController attribute) model_for_ref() (in module cryosparc.registry) module cryosparc cryosparc.api cryosparc.auth cryosparc.cli cryosparc.constants cryosparc.controllers cryosparc.controllers.job cryosparc.controllers.project cryosparc.controllers.workspace cryosparc.dataset cryosparc.dataset.column cryosparc.dataset.core cryosparc.dataset.dtype cryosparc.dataset.row cryosparc.errors cryosparc.json_util cryosparc.model_registry cryosparc.models cryosparc.models.api_request cryosparc.models.api_response cryosparc.models.asset cryosparc.models.auth cryosparc.models.benchmarks cryosparc.models.config cryosparc.models.diagnostics cryosparc.models.event cryosparc.models.exposure cryosparc.models.external cryosparc.models.file_browser cryosparc.models.gpu cryosparc.models.instance cryosparc.models.job cryosparc.models.job_register cryosparc.models.job_spec cryosparc.models.license cryosparc.models.notification cryosparc.models.params cryosparc.models.preview cryosparc.models.project cryosparc.models.resource cryosparc.models.scheduler_lane cryosparc.models.scheduler_target cryosparc.models.service cryosparc.models.services cryosparc.models.session cryosparc.models.session_config_profile cryosparc.models.session_params cryosparc.models.session_spec cryosparc.models.signature cryosparc.models.tag cryosparc.models.user cryosparc.models.when cryosparc.models.workspace cryosparc.mrc cryosparc.platform cryosparc.registry cryosparc.search cryosparc.spec cryosparc.star cryosparc.stream cryosparc.stream_registry cryosparc.tools cryosparc.util monitor_port (Node attribute) motion_at (ExposureAttributes attribute) motion_override_K_X (LivePreprocessingParams attribute) motion_override_K_Y (LivePreprocessingParams attribute) motion_override_K_Z (LivePreprocessingParams attribute) motion_res_max_align (LivePreprocessingParams attribute) MotionData (class in cryosparc.models.exposure) move() (JobsAPI method) (ProjectsAPI method) movie_blob (ExposureElement attribute) MovieBlob (class in cryosparc.models.exposure) mscope_params (ExposureElement attribute) MScopeParams (class in cryosparc.models.exposure) mtime (BrowseFile attribute) multiple_of (JobRegisterParamSpec attribute) N name (Bookmark attribute) (ExternalOutputSpec attribute) (Gpu attribute) (GpuInfo attribute) (Hello attribute) (InputResult attribute) (InputSlot attribute) (JobLastAccessed attribute) (OutputResult attribute) (OutputSlot attribute) (ParamSection attribute) (Profile attribute) (ProjectLastAccessed attribute) (SchedulerLane attribute) (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) (SessionAttribute attribute) (SessionLastAccessed attribute) (Slot attribute) (UiTileImage attribute) (User attribute) (WorkspaceLastAccessed attribute) ndarray_from_json() (in module cryosparc.json_util) ndarray_to_json() (in module cryosparc.json_util) neg_stain (LivePreprocessingParams attribute) (MScopeParams attribute) NEWEST_FORMAT (in module cryosparc.dataset) no_check_inputs_ready (Job attribute) Node (class in cryosparc.models.scheduler_target) non_ancestors (WorkspaceAncestorUidsResponse attribute) non_ancestors_of_final_results (GetFinalResultsResponse attribute) non_descendants (WorkspaceDescendantUidsResponse attribute) notes (Session attribute) notes_lock (Session attribute) Notification (class in cryosparc.models.notification) notifications (APIClient attribute) NotificationsAPI (class in cryosparc.api) nsymbt (Header attribute) num_cols (UiTileImage attribute) num_exposures_found (ExposureGroup attribute) num_items (Output attribute) (OutputResult attribute) num_particles (LiveVolumeInfo attribute) num_particles_selected (TemplateClassInfo attribute) num_particles_total (TemplateClassInfo attribute) num_queued_jobs (LicenseInstance attribute) num_rows (UiTileImage attribute) num_tokens (Job attribute) NUMPY_FORMAT (in module cryosparc.dataset) nvrtc_version (InstanceInformation attribute) nx (Header attribute) (SessionStats attribute) ny (Header attribute) (SessionStats attribute) nz (Header attribute) O ofd_hard_limit (InstanceInformation attribute) ofd_soft_limit (InstanceInformation attribute) ONE_MIB (in module cryosparc.constants) OpenBinaryMode (in module cryosparc.util) OpenTextMode (in module cryosparc.util) optimize_for_gpu_memory (LivePreprocessingParams attribute) origin (Header attribute) Output (class in cryosparc.models.job_spec) output (Connection attribute) (InputResult attribute) (OutputRef attribute) output_f16 (LivePreprocessingParams attribute) output_fcrop_factor (LivePreprocessingParams attribute) output_shape (PickerInfoElement attribute) OutputRef (class in cryosparc.models.job_spec) OutputResult (class in cryosparc.models.job_spec) Outputs (class in cryosparc.models.job_spec) outputs (JobController property) (JobRegisterJobSpec attribute) (JobSpec attribute) OutputSlot (class in cryosparc.models.job_spec) OutputSpec (class in cryosparc.models.job_spec) OutputSpecs (class in cryosparc.models.job_spec) override_total_exp (LivePreprocessingParams attribute) owner_user_id (Project attribute) P padarray() (in module cryosparc.util) parameter_version (Exposure attribute) (Session attribute) Params (class in cryosparc.models.job_spec) params (JobController property) (JobRegisterJobSpec attribute) (JobSpec attribute) (Session attribute) ParamSection (class in cryosparc.models.params) parents (Job attribute) particle_blob (ExposureGroups attribute) particle_deep (ExposureGroups attribute) particle_extracted (ExposureGroups attribute) particle_manual (ExposureGroups attribute) particle_manual_extracted (ExposureGroups attribute) particle_read_benchmark_dir (PerformanceBenchmark attribute) particle_template (ExposureGroups attribute) ParticleInfo (class in cryosparc.models.exposure) ParticleManual (class in cryosparc.models.exposure) particles (DataManagementStats attribute) passthrough (Output attribute) (OutputResult attribute) (OutputSpec attribute) password (Services attribute) (SHA256Password attribute) PasswordService (class in cryosparc.models.user) path (Bookmark attribute) (CTF attribute) (GainRefBlob attribute) (MicrographBlob attribute) (MotionData attribute) (MovieBlob attribute) (ParticleInfo attribute) (ParticleManual attribute) (Phase2ParticleOutputInfo attribute) (PickerInfoElement attribute) (ProjectSymlink attribute) (RecentPath attribute) (StatBlob attribute) path_abs (BrowseFile attribute) pattern (JobRegisterParamSpec attribute) pause() (SessionsAPI method) paused_at (Session attribute) PerformanceBenchmark (class in cryosparc.models.benchmarks) persistence_mode (GpuInfo attribute) phase2_abinit_info (Session attribute) phase2_abinit_job (Session attribute) phase2_abinit_num_particles_in (Session attribute) phase2_abinit_params_spec (Session attribute) phase2_abinit_ready (Session attribute) phase2_abinit_restart (Session attribute) phase2_class2D_info (Session attribute) phase2_class2D_job (Session attribute) phase2_class2D_last_updated (Session attribute) phase2_class2D_num_particles_accepted (Session attribute) phase2_class2D_num_particles_in (Session attribute) phase2_class2D_num_particles_rejected (Session attribute) phase2_class2D_num_particles_seen (Session attribute) phase2_class2D_params_spec (Session attribute) phase2_class2D_params_spec_used (Session attribute) phase2_class2D_particles_out (Session attribute) phase2_class2D_ready (Session attribute) phase2_class2D_ready_partial (Session attribute) phase2_class2D_restart (Session attribute) phase2_refine_job (Session attribute) phase2_refine_last_updated (Session attribute) phase2_refine_num_particles_in (Session attribute) phase2_refine_params_spec (Session attribute) phase2_refine_params_spec_used (Session attribute) phase2_refine_ready (Session attribute) phase2_refine_ready_partial (Session attribute) phase2_refine_restart (Session attribute) phase2_select2D_job (Session attribute) Phase2ParticleOutputInfo (class in cryosparc.models.session) phase_one_gpus (LiveComputeResources attribute) phase_one_lane (LiveComputeResources attribute) phase_one_wait_for_exposures (RunConfiguration attribute) (Session attribute) phase_one_workers (Session attribute) phase_one_workers_per_gpu (LiveComputeResources attribute) phase_one_workers_soft_kill (Session attribute) phase_plate (LivePreprocessingParams attribute) (MScopeParams attribute) phase_shift (ExposureAttributes attribute) phase_shift_max (LivePreprocessingParams attribute) phase_shift_min (LivePreprocessingParams attribute) phase_shift_rad (CTF attribute) phase_two_gpus (LiveComputeResources attribute) phase_two_lane (LiveComputeResources attribute) phase_two_ssd (LiveComputeResources attribute) physical_cores (InstanceInformation attribute) pick_at (ExposureAttributes attribute) picker_type (Exposure attribute) (PickerInfoElement attribute) PickerInfoElement (class in cryosparc.models.exposure) PickerLocations (class in cryosparc.models.exposure) picking_thresholds (Session attribute) PickingThresholds (class in cryosparc.models.session) PID_main (Job attribute) PID_monitor (Job attribute) PID_workers (Job attribute) platform_architecture (InstanceInformation attribute) platform_node (InstanceInformation attribute) platform_release (InstanceInformation attribute) platform_version (InstanceInformation attribute) port_api (SystemInfo attribute) port_app (SystemInfo attribute) port_command_vis (SystemInfo attribute) port_mongo (SystemInfo attribute) port_rtp_webapp (SystemInfo attribute) power_limit (GpuInfo attribute) pre_restoration_size (Session attribute) preferences (User attribute) prefixes() (Dataset method) prev_status (DataManagementStat attribute) preview_delete() (ProjectsAPI method) (WorkspacesAPI method) preview_img_1x (Exposure attribute) preview_img_2x (Exposure attribute) preview_imgfiles (InteractiveEvent attribute) print_input_spec() (JobController method) print_job_types() (CryoSPARC method) print_output_spec() (JobController method) print_param_spec() (JobController method) print_table() (in module cryosparc.util) priority (Exposure attribute) (Job attribute) (LiveComputeResources attribute) Profile (class in cryosparc.models.user) profile (User attribute) progress (Job attribute) progress_pct (Notification attribute) Project (class in cryosparc.models.project) project (TagCounts attribute) project_dir (Project attribute) project_dir_default (FileBrowserPrefixes attribute) project_params_pdef (Project attribute) project_stats (Project attribute) project_uid (CheckpointEvent attribute) (DeleteJobPreview attribute) (DeleteProjectWorkspacePreview attribute) (Event attribute) (Exposure attribute) (GridFSFile attribute) (ImageEvent attribute) (InteractiveEvent attribute) (Job attribute) (JobController attribute) (KeepJobPreview attribute) (Notification attribute) (PerformanceBenchmark attribute) (RecentJob attribute) (RecentSession attribute) (RecentWorkspace attribute) (Session attribute) (TextEvent attribute) (Workspace attribute) (WorkspaceController attribute) project_uid_num (Job attribute) (Session attribute) (Workspace attribute) ProjectController (class in cryosparc.controllers.project) ProjectLastAccessed (class in cryosparc.models.project) projects (APIClient attribute) ProjectsAPI (class in cryosparc.api) ProjectStats (class in cryosparc.models.project) ProjectSymlink (class in cryosparc.models.project) ProjectWorkflowInfo (class in cryosparc.models.project) psize_A (LivePreprocessingParams attribute) (MicrographBlob attribute) (MotionData attribute) (MovieBlob attribute) (StatBlob attribute) psize_mic (LiveClass2DParams attribute) (LiveRefineParams attribute) PurePosixPathProperty (class in cryosparc.util) Q qdel_cmd_tpl (Cluster attribute) qinfo_cmd_tpl (Cluster attribute) qstat_cmd_tpl (Cluster attribute) qsub_cmd_tpl (Cluster attribute) query() (Dataset method) query_mask() (Dataset method) queue() (ExternalJobController method) (JobController method) queue_message (Job attribute) queue_paused (Project attribute) queue_status (Job attribute) queued_at (Job attribute) (JobSearch attribute) queued_by_user_id (Job attribute) queued_job_hash (Job attribute) queued_jobs (LicenseInstance attribute) queued_to_gpu (Job attribute) queued_to_hostname (Job attribute) queued_to_lane (Job attribute) R R (class in cryosparc.dataset.row) RAM (ResourceSlots attribute) ram (ResourceSpec attribute) random_disk_models (PerformanceBenchmark attribute) random_integers() (in module cryosparc.util) RangeThreshold (class in cryosparc.models.session) raw (DataManagementStats attribute) read() (in module cryosparc.mrc) (in module cryosparc.star) read_root() (APIClient method) ready_at (ExposureAttributes attribute) reason (KeepJobPreview attribute) reassign_uids() (Dataset method) recalculate_project_intermediate_results_size() (JobsAPI method) recalculate_size() (JobsAPI method) recalculate_size_async() (JobsAPI method) RecentJob (class in cryosparc.models.user) recentJobs (UserState attribute) RecentPath (class in cryosparc.models.user) recentPaths (FileBrowserState attribute) recentProjects (UserState attribute) RecentSession (class in cryosparc.models.user) recentSessions (UserState attribute) RecentWorkspace (class in cryosparc.models.user) recentWorkspaces (UserState attribute) reconnect() (JobsAPI method) reference_platform_node (ReferencePerformanceBenchmark attribute) ReferencePerformanceBenchmark (class in cryosparc.models.benchmarks) refine_symmetry (LiveRefineParams attribute) refresh() (CryoSPARC method) (JobController method) (ProjectController method) (WorkspaceController method) refresh_nodes() (ResourcesAPI method) refresh_size() (ProjectsAPI method) register() (UsersAPI method) register_token (User attribute) reinitialize_phase2_class2D() (SessionsAPI method) remove_cluster() (ResourcesAPI method) remove_lane() (ResourcesAPI method) remove_manual_pick() (ExposuresAPI method) remove_node() (ResourcesAPI method) remove_tag() (JobsAPI method) (ProjectsAPI method) (SessionsAPI method) (WorkspacesAPI method) remove_user_access() (ProjectsAPI method) rename_field() (Dataset method) rename_fields() (Dataset method) rename_prefix() (Dataset method) repeat_allowed (Input attribute) (InputSpec attribute) replace() (Dataset method) reprocess_single_exposure() (ExposuresAPI method) request_reset_password() (UsersAPI method) requeue_windows_ends_at (Job attribute) required (InputSlot attribute) (Slot attribute) required_param (JobRegisterParamSpec attribute) res_A (TemplateClassInfo attribute) reserved_licenses (LicenseInstance attribute) reset_all_attribute_thresholds() (SessionsAPI method) reset_all_exposures() (ExposuresAPI method) reset_attribute_threshold() (SessionsAPI method) reset_autodump() (ProjectsAPI method) reset_exposure() (ExposuresAPI method) reset_failed_exposures() (ExposuresAPI method) reset_manual_reject_exposures() (ExposuresAPI method) reset_password() (UsersAPI method) reset_token (User attribute) resource_fixed (Node attribute) resource_slots (Node attribute) resource_spec (JobSpec attribute) resources (APIClient attribute) resources_allocated (Job attribute) ResourcesAPI (class in cryosparc.api) ResourceSlots (class in cryosparc.models.resource) ResourceSpec (class in cryosparc.models.resource) restoration_notification_id (Session attribute) restoration_user_id (Session attribute) restore_session() (SessionsAPI method) Result (in module cryosparc.util) result (InputResult attribute) results (Connection attribute) (Output attribute) resume (Services attribute) rigid_motion (ExposureElement attribute) roles (User attribute) root (Inputs attribute) (InputSpecs attribute) (Outputs attribute) (OutputSpecs attribute) rotate_num (GainRefBlob attribute) round (SessionAttribute attribute) Row (class in cryosparc.dataset.row) rows() (Dataset method) rtp_childs (Session attribute) rtp_handle_func (RtpChild attribute) RtpChild (class in cryosparc.models.session) RtpWorkerState (class in cryosparc.models.session) run (JobWorkflowInfo attribute) run() (ExternalJobController method) (in module cryosparc.cli) run_as_user (Job attribute) run_configuration (SessionConfigProfile attribute) (SessionConfigProfileBody attribute) RunConfiguration (class in cryosparc.models.session_config_profile) RunError (class in cryosparc.models.job) running_at (Job attribute) (Session attribute) runs (ProjectWorkflowInfo attribute) RuntimeDiagnostics (class in cryosparc.models.diagnostics) S save() (Dataset method) (InstanceAuthSessions method) save_external_result() (CryoSPARC method) (ProjectController method) (WorkspaceController method) save_output() (ExternalJobController method) (JobsAPI method) scheduler_targets (RuntimeDiagnostics attribute) SchedulerLane (class in cryosparc.models.scheduler_lane) SchedulerTarget (class in cryosparc.models.scheduler_target) SchedulerTargetCluster (class in cryosparc.models.scheduler_target) SchedulerTargetInformation (class in cryosparc.models.diagnostics) SchedulerTargetNode (class in cryosparc.models.scheduler_target) script_tpl (Cluster attribute) section (JobRegisterParamSpec attribute) select_all_class2d_templates() (SessionsAPI method) select_all_picking_templates() (SessionsAPI method) select_class2d_templates_with_threshold_index() (SessionsAPI method) select_class2d_templates_with_thresholds() (SessionsAPI method) select_phase2_abinit_volume() (SessionsAPI method) select_picking_templates_with_threshold_index() (SessionsAPI method) select_picking_templates_with_thresholds() (SessionsAPI method) selected (LiveVolumeInfo attribute) (TemplateClassInfo attribute) send_cmd_tpl (Cluster attribute) sequential_disk_models (PerformanceBenchmark attribute) sequential_read_benchmark_dir (PerformanceBenchmark attribute) service (Hello attribute) ServiceLogLevel (in module cryosparc.models.service) Services (class in cryosparc.models.user) services (User attribute) Session (class in cryosparc.models.session) session (TagCounts attribute) session_count (ProjectStats attribute) session_dir (Session attribute) session_id (AppSession attribute) session_params (SessionConfigProfile attribute) (SessionConfigProfileBody attribute) session_uid (Exposure attribute) (RecentSession attribute) (Session attribute) session_uid_num (Session attribute) SessionAttribute (class in cryosparc.models.session) SessionBuildError (class in cryosparc.models.session) SessionConfigProfile (class in cryosparc.models.session_config_profile) SessionConfigProfileBody (class in cryosparc.models.session_config_profile) SessionLastAccessed (class in cryosparc.models.session) sessions (APIClient attribute) SessionsAPI (class in cryosparc.api) SessionStats (class in cryosparc.models.session) SessionStatus (in module cryosparc.models.session_spec) set() (CacheAPI method) set_cluster_custom_vars() (JobsAPI method) set_default_job_priority() (ConfigAPI method) set_default_param() (ProjectsAPI method) set_default_random() (Spool class method) set_description() (JobController method) (JobsAPI method) (ProjectController method) (ProjectsAPI method) (WorkspaceController method) (WorkspacesAPI method) set_file_browser_settings() (ConfigAPI method) (UsersAPI method) set_final_result() (JobsAPI method) set_generate_intermediate_results_settings() (ProjectsAPI method) set_instance_banner() (ConfigAPI method) set_lanes() (UsersAPI method) set_login_message() (ConfigAPI method) set_output_image() (ExternalJobController method) (JobsAPI method) set_owner() (ProjectsAPI method) set_param() (JobController method) (JobsAPI method) set_phase2_abinit_job() (SessionsAPI method) set_priority() (JobsAPI method) set_random() (Spool method) set_role() (UsersAPI method) set_session_exposure_processing_priority() (SessionsAPI method) set_session_phase_one_wait_for_exposures() (SessionsAPI method) set_state_var() (UsersAPI method) set_template_creation_job() (SessionsAPI method) set_tile_image() (ExternalJobController method) (JobsAPI method) set_title() (JobController method) (JobsAPI method) (ProjectController method) (ProjectsAPI method) (WorkspaceController method) (WorkspacesAPI method) setup_phase2_abinit() (SessionsAPI method) setup_phase2_class2D() (SessionsAPI method) setup_phase2_refine() (SessionsAPI method) setup_spooling() (Spool method) setup_template_creation_class2D() (SessionsAPI method) SHA256Password (class in cryosparc.models.api_request) shape (GainRefBlob attribute) Shape (in module cryosparc.spec) shape (MicrographBlob attribute) (MovieBlob attribute) (StatBlob attribute) shorttitle (JobRegisterJobSpec attribute) show_message (UpdateTag attribute) signature (AppSession attribute) signatures (ImportSignature attribute) size (BrowseFile attribute) (DataManagementStat attribute) (Exposure attribute) (Project attribute) size_last_updated (Project attribute) slice() (Dataset method) Slot (class in cryosparc.spec) slots (AllocatedResources attribute) (Input attribute) (InputSpec attribute) (Output attribute) (OutputSpec attribute) SlotSpec (in module cryosparc.spec) smooth_lambda_cal (LivePreprocessingParams attribute) spec (ExternalOutputSpec attribute) (Job attribute) specs (JobRegister attribute) spectrum_dim (CtfStats attribute) spline_motion (ExposureElement attribute) split() (Spool method) split_by() (Dataset method) (Spool method) split_by_splits() (Spool method) split_from_field() (Spool method) split_half_in_order() (Spool method) split_into_quarter() (Spool method) Spool (class in cryosparc.dataset.row) spool() (Spool method) SSD (FixedResourceSlots attribute) ssd (ResourceSpec attribute) ssh_str (Node attribute) Stability (in module cryosparc.models.job_spec) stability (JobRegisterJobSpec attribute) stage (Exposure attribute) star_job() (JobsAPI method) star_project() (ProjectsAPI method) star_session() (SessionsAPI method) star_workspace() (WorkspacesAPI method) starred_by (Job attribute) (Project attribute) (Session attribute) (Workspace attribute) start() (ExternalJobController method) (SessionsAPI method) start_and_migrate() (APIClient method) start_extract_manual() (SessionsAPI method) started_at (Job attribute) (JobSearch attribute) StatBlob (class in cryosparc.models.exposure) state (User attribute) stats (Session attribute) status (DataManagementStat attribute) (DeleteJobPreview attribute) (Job attribute) (JobController property) (JobSearch attribute) (KeepJobPreview attribute) (Notification attribute) (RtpChild attribute) (RtpWorkerState attribute) (Session attribute) (User attribute) status_num (Job attribute) stop() (ExternalJobController method) stop_phase2_abinit() (SessionsAPI method) stop_phase2_class2D() (SessionsAPI method) stop_phase2_refine() (SessionsAPI method) strbytelen() (in module cryosparc.util) Stream (class in cryosparc.stream) stream() (Dataset method) Streamable (class in cryosparc.stream) strencodenull() (in module cryosparc.util) subprocess() (JobController method) subset() (Dataset method) subtype (InteractiveEvent attribute) summary (Output attribute) SUPPORTED_EXPOSURE_FORMATS (in module cryosparc.tools) sw_power_limit (GpuInfo attribute) symlink() (CryoSPARC method) (JobController method) (ProjectController method) (ProjectsAPI method) SystemInfo (class in cryosparc.models.config) T table() (UsersAPI method) Tag (class in cryosparc.models.tag) TagCounts (class in cryosparc.models.tag) tags (APIClient attribute) (Job attribute) (JobRegisterJobSpec attribute) (Project attribute) (Session attribute) (Workspace attribute) TagsAPI (class in cryosparc.api) take() (Dataset method) target (AllocatedResources attribute) (ProjectSymlink attribute) temperature (GpuInfo attribute) template_angular_spacing_deg (LivePreprocessingParams attribute) template_creation_info (Session attribute) template_creation_job (Session attribute) template_creation_num_particles_in (Session attribute) template_creation_project (Session attribute) template_creation_ready (Session attribute) template_diameter (LivePreprocessingParams attribute) template_lowpass_res (LivePreprocessingParams attribute) template_lowpass_res_template (LivePreprocessingParams attribute) template_max_num_hits (LivePreprocessingParams attribute) template_min_distance (LivePreprocessingParams attribute) template_ncc_score (PickingThresholds attribute) template_num_plot (LivePreprocessingParams attribute) template_num_process (LivePreprocessingParams attribute) template_pick_score_median (ExposureAttributes attribute) template_power (PickingThresholds attribute) template_use_ctf (LivePreprocessingParams attribute) TemplateClassInfo (class in cryosparc.models.session) templates_from_job (LivePreprocessingParams attribute) templates_selected (LivePreprocessingParams attribute) TemplateSelectionThreshold (class in cryosparc.models.session) test (Exposure attribute) test() (APIClient method) test_connection() (CryoSPARC method) test_parameters (Exposure attribute) text (ImageEvent attribute) (InteractiveEvent attribute) (TextEvent attribute) TextContentType (in module cryosparc.spec) TextEvent (class in cryosparc.models.event) TextFormat (in module cryosparc.spec) this_instance (LicenseInstance attribute) thresh_power_max (LivePreprocessingParams attribute) thresh_power_min (LivePreprocessingParams attribute) thresh_score_min (LivePreprocessingParams attribute) Threshold (class in cryosparc.models.session) threshold (TemplateSelectionThreshold attribute) threshold_reject (Exposure attribute) thumb_shape (Exposure attribute) thumbnails (DataManagementStats attribute) thumbs_at (ExposureAttributes attribute) timings (PerformanceBenchmark attribute) (ReferencePerformanceBenchmark attribute) title (DeleteJobPreview attribute) (DeleteProjectWorkspacePreview attribute) (Input attribute) (InputSpec attribute) (Job attribute) (JobController property) (JobGroup attribute) (JobRegisterJobSpec attribute) (JobRegisterParamSpec attribute) (KeepJobPreview attribute) (Output attribute) (OutputSpec attribute) (ParamSection attribute) (Project attribute) (ProjectController property) (ReferencePerformanceBenchmark attribute) (SchedulerLane attribute) (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) (Session attribute) (SessionAttribute attribute) (SessionConfigProfile attribute) (SessionConfigProfileBody attribute) (Tag attribute) (Workspace attribute) (WorkspaceController property) to_cstrs() (Dataset method) to_fixed() (Column method) to_list() (Dataset method) (Row method) to_pystrs() (Dataset method) to_records() (Dataset method) toggle_all_class2d_templates() (SessionsAPI method) toggle_all_picking_templates() (SessionsAPI method) toggle_class2d_template() (SessionsAPI method) toggle_manual_reject_exposure() (ExposuresAPI method) toggle_picking_template() (SessionsAPI method) Token (class in cryosparc.models.auth) token_type (Token attribute) tokens_acquired_at (Job attribute) tokens_requested_at (Job attribute) toolkit_version (InstanceInformation attribute) topen() (in module cryosparc.util) total (TagCounts attribute) total_accepted (SessionStats attribute) total_blob_picks (ExposureAttributes attribute) (SessionStats attribute) total_deep_picks (SessionStats attribute) total_dose_e_per_A2 (LivePreprocessingParams attribute) (MScopeParams attribute) total_exposures (SessionStats attribute) total_extracted_particles (ExposureAttributes attribute) (SessionStats attribute) total_extracted_particles_blob (ExposureAttributes attribute) (SessionStats attribute) total_extracted_particles_deep (SessionStats attribute) total_extracted_particles_manual (ExposureAttributes attribute) (SessionStats attribute) total_extracted_particles_template (ExposureAttributes attribute) (SessionStats attribute) total_failed (SessionStats attribute) total_in_progress (SessionStats attribute) total_manual_picked_exposures (SessionStats attribute) total_manual_picks (ExposureAttributes attribute) (SessionStats attribute) total_memory (InstanceInformation attribute) total_motion_dist (ExposureAttributes attribute) total_queued (SessionStats attribute) total_ready (SessionStats attribute) total_rejected (SessionStats attribute) total_seen (SessionStats attribute) total_template_picks (ExposureAttributes attribute) (SessionStats attribute) total_test (SessionStats attribute) total_thumbs (SessionStats attribute) tpl_vars (Cluster attribute) traceback (JobRegisterError attribute) trimarray() (in module cryosparc.util) ttl_seconds (Notification attribute) type (BrowseFile attribute) (BrowseFileResponse attribute) (CheckpointEvent attribute) (Cluster attribute) (CTF attribute) (CtfStats attribute) (DeleteJobPreview attribute) (ImageEvent attribute) (Input attribute) (InputSpec attribute) (InteractiveEvent attribute) (JobBuildError attribute) (JobController property) (JobRegisterError attribute) (JobRegisterJobSpec attribute) (JobRegisterParamSpec attribute) (JobRegisterParamTypeSpec attribute) (JobSearch attribute) (JobSpec attribute) (KeepJobPreview attribute) (MotionData attribute) (Node attribute) (Output attribute) (OutputSpec attribute) (PerformanceBenchmark attribute) (ReferencePerformanceBenchmark attribute) (SchedulerLane attribute) (SessionBuildError attribute) (Tag attribute) (TextEvent attribute) U u32bytesle() (in module cryosparc.util) u32intle() (in module cryosparc.util) ui_tile_height (JobSpec attribute) ui_tile_images (Job attribute) ui_tile_width (JobSpec attribute) uid (DeleteJobPreview attribute) (DeleteProjectWorkspacePreview attribute) (Exposure attribute) (ExposureElement attribute) (Job attribute) (JobController attribute) (KeepJobPreview attribute) (Project attribute) (ProjectController attribute) (RtpChild attribute) (Session attribute) (Tag attribute) (Workspace attribute) (WorkspaceController attribute) uid_num (Job attribute) (Project attribute) (Session attribute) (Tag attribute) (Workspace attribute) UiTileImage (class in cryosparc.models.job) unarchive() (ProjectsAPI method) union() (Dataset method) union_many() (Dataset class method) unlink (DeleteWorkspacePreview attribute) unlink_from_workspace() (JobsAPI method) unset_state_var() (UsersAPI method) unstar_job() (JobsAPI method) unstar_project() (ProjectsAPI method) unstar_session() (SessionsAPI method) unstar_workspace() (WorkspacesAPI method) update() (TagsAPI method) (UsersAPI method) update_attribute_threshold() (SessionsAPI method) update_cluster_custom_vars() (ResourcesAPI method) update_compute_configuration() (SessionsAPI method) update_configuration_profile() (SessionsAPI method) update_directory_symlinks() (JobsAPI method) update_event_log() (JobsAPI method) update_exposure_group() (SessionsAPI method) update_node_lane() (ResourcesAPI method) update_phase2_abinit_params() (SessionsAPI method) update_phase2_class2D_params() (SessionsAPI method) update_phase2_refine_params() (SessionsAPI method) update_picking_threshold_values() (SessionsAPI method) update_session_params() (SessionsAPI method) update_target_cache_path() (ResourcesAPI method) updated_at (CheckpointEvent attribute) (Event attribute) (Exposure attribute) (ImageEvent attribute) (InteractiveEvent attribute) (Job attribute) (JobRegister attribute) (JobSearch attribute) (Notification attribute) (PerformanceBenchmark attribute) (Project attribute) (ProjectStats attribute) (ReferencePerformanceBenchmark attribute) (Session attribute) (SessionConfigProfile attribute) (Tag attribute) (TextEvent attribute) (User attribute) (Workspace attribute) (WorkspaceStats attribute) UpdateTag (class in cryosparc.models.license) upload() (AssetsAPI method) (CryoSPARC method) (JobController method) (ProjectController method) upload_dataset() (CryoSPARC method) (JobController method) (ProjectController method) upload_file() (ProjectsAPI method) upload_mrc() (CryoSPARC method) (JobController method) (ProjectController method) uploadDate (GridFSFile attribute) use_circle (LivePreprocessingParams attribute) use_ellipse (LivePreprocessingParams attribute) use_ring (LivePreprocessingParams attribute) used_memory (InstanceInformation attribute) User (class in cryosparc.models.user) user (CryoSPARC property) user_config_path() (in module cryosparc.platform) user_id (AppSession attribute) UserAuthSessions (class in cryosparc.auth) userCanSetJobPriority (UserState attribute) userFileBrowserState (UserState attribute) users (APIClient attribute) users_with_access (Project attribute) UsersAPI (class in cryosparc.api) UserState (class in cryosparc.models.user) V valid (LicenseInstance attribute) valid_expiration_time() (in module cryosparc.cli) validate_path (JobRegisterParamSpec attribute) value (RangeThreshold attribute) (Threshold attribute) var_3D_disp (GenerateIntermediateResultsSettings attribute) variable_dose (LivePreprocessingParams attribute) verified (Email attribute) verify_app_session() (APIClient method) verify_cluster() (ResourcesAPI method) version (Hello attribute) (InputResult attribute) (InstanceInformation attribute) (Job attribute) (LicenseInstance attribute) (SystemInfo attribute) version_created (Job attribute) VERSION_REGEX (in module cryosparc.tools) versions (OutputResult attribute) view() (JobsAPI method) (ProjectsAPI method) (SessionsAPI method) (WorkspacesAPI method) vol_gname (LiveVolumeInfo attribute) VOXEL_TYPES (in module cryosparc.mrc) W wait_for_done() (JobController method) wait_for_status() (JobController method) waiting_at (Job attribute) (JobSearch attribute) warning (RunError attribute) When (class in cryosparc.models.when) when (LoginToken attribute) worker_bin_path (SchedulerTarget attribute) (SchedulerTargetCluster attribute) (SchedulerTargetInformation attribute) (SchedulerTargetNode attribute) worker_juid (Exposure attribute) workflow (Job attribute) workflows (APIClient attribute) (Project attribute) WorkflowsAPI (class in cryosparc.api) Workspace (class in cryosparc.models.workspace) workspace (TagCounts attribute) workspace_count (ProjectStats attribute) workspace_stats (Session attribute) (Workspace attribute) workspace_type (Session attribute) (Workspace attribute) workspace_uid (RecentJob attribute) (RecentWorkspace attribute) workspace_uids (DeleteJobPreview attribute) (Job attribute) (KeepJobPreview attribute) WorkspaceAncestorUidsResponse (class in cryosparc.models.api_response) WorkspaceController (class in cryosparc.controllers.workspace) WorkspaceDescendantUidsResponse (class in cryosparc.models.api_response) WorkspaceLastAccessed (class in cryosparc.models.workspace) workspaces (APIClient attribute) (DeleteProjectPreview attribute) WorkspacesAPI (class in cryosparc.api) WorkspaceStats (class in cryosparc.models.workspace) write() (ConfigAPI method) (in module cryosparc.mrc) (in module cryosparc.star) write_blocks() (in module cryosparc.star) X xlen (Header attribute) Y ylen (Header attribute) Z zero_shift_frame (MotionData attribute) zlen (Header attribute)
